PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023521142.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GeBP
Protein Properties Length: 200aa    MW: 23679.9 Da    PI: 5.7456
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023521142.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57370.24.2e-2228119298
          DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkks.isfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                     +f +lwseeDei+l  G  ++   +g ++++di +fyef+k + i + v++sq+++Ki rLKkKf ++++k    ++++ +++h q  fels ki
  XP_023521142.1  28 KFPKLWSEEDEISLVSGYYEY---QGIKAKSDIGGFYEFIKPRlIRSCVKQSQVSDKICRLKKKFMENSSK---FEHNTHNTPHLQTLFELSTKI 116
                     6899*************9999...8999999**********652778899*********************...66678899************* PP

          DUF573  96 Wgs 98 
                     Wgs
  XP_023521142.1 117 WGS 119
                     *95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MQEEEVECPN EEDGEEEMKE TKNESGTKFP KLWSEEDEIS LVSGYYEYQG IKAKSDIGGF  60
YEFIKPRLIR SCVKQSQVSD KICRLKKKFM ENSSKFEHNT HNTPHLQTLF ELSTKIWGSM  120
VCSKFEVSND LMCEEFDGFL FHEGVDVELL ESERVRSMKR KFGEVQLCRS RFEYKQAKLA  180
KNMERLKYDH YNRALVKFFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.15e-11GeBP family protein