PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023521315.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 358aa MW: 40819.5 Da PI: 7.8132

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023521315.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.5	1.2e-53	14	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeel+++yLkkkv+ +k+++ evi+e+d++k+ePwdL++k++ ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + XP_023521315.1 14 VPPGFRFHPTDEELLHYYLKKKVSFQKFDM-EVIREIDLNKIEPWDLQEKCRIgstPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCI 107 69**************************.99**********964433122456********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 + + +++g++ktLvfy+grap+g+ktdW+mheyrle XP_023521315.1 108 RN-SYKKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 143 9.8999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MGSSGGSGGG GGGVPPGFRF HPTDEELLHY YLKKKVSFQK FDMEVIREID LNKIEPWDLQ 60 EKCRIGSTPQ NEWYFFSHKD RKYPTGSRTN RATNAGFWKA TGRDKCIRNS YKKIGMRKTL 120 VFYRGRAPHG QKTDWIMHEY RLEDTDDPHF NNSEDGWVVC RVFKKKNLFK VTNEDGGGGS 180 SANSDPQLNN AQSSASITTP RTFMHRESQY QLRQPHQNYA SLPTFELNKS DLALHYMPST 240 APPSHFPHHL FHPNISTMNS NHKSLGDASE AYDYPALSSL PPDTPLMVKQ LMSNPETSQP 300 ADSMTEPWAM LDRLVTSHLG NEDSSKDVRY EDEHGLSSIS QINQLSMRGE MDFWRYAK

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MGSSGGSGGG GGGVPPGFRF HPTDEELLHY YLKKKVSFQK FDMEVIREID LNKIEPWDLQ  60
EKCRIGSTPQ NEWYFFSHKD RKYPTGSRTN RATNAGFWKA TGRDKCIRNS YKKIGMRKTL  120
VFYRGRAPHG QKTDWIMHEY RLEDTDDPHF NNSEDGWVVC RVFKKKNLFK VTNEDGGGGS  180
SANSDPQLNN AQSSASITTP RTFMHRESQY QLRQPHQNYA SLPTFELNKS DLALHYMPST  240
APPSHFPHHL FHPNISTMNS NHKSLGDASE AYDYPALSSL PPDTPLMVKQ LMSNPETSQP  300
ADSMTEPWAM LDRLVTSHLG NEDSSKDVRY EDEHGLSSIS QINQLSMRGE MDFWRYAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	1e-144	NAC family protein