PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023521341.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 239aa    MW: 26280.1 Da    PI: 5.0252
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023521341.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.57.5e-111952351055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L++l+P+      +K++ +++Le+Av+Y+k Lq
  XP_023521341.1 195 RKRRERINERLKMLQKLVPNG-----TKVDISTMLEEAVHYVKFLQ 235
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MEALGAFTDG EWDSFTAIFS SLQELDQSLI PTELPLPNNG ASELPNNTWF YSLDAFDPNF  60
QSSVQQDMSC SSCTPVWIDQ VQNCLAATAE ACDHGSQPPQ LVDGNEPTAM KRKDKNRELS  120
SNQKKKTRIS GDGQKKKTQK KTEEIVEDAG VSEGQSSSSE EEGHGGSATT SDGGMNGKSR  180
ASRGSATDPQ SLYARKRRER INERLKMLQK LVPNGTKVDI STMLEEAVHY VKFLQLQIK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1111126KRKDKNRELSSNQKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.11e-36bHLH family protein