PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023521417.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 89aa    MW: 10089.7 Da    PI: 10.0492
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023521417.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.71.7e-151462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W+++Ed +l++ ++ +G+g +W + +++ g++R++k+c++rw++yl
   XP_023521417.1 14 KGPWSPQEDTQLKHFIQTYGTGgNWISLPHKAGLKRCGKSCRLRWLNYL 62
                     79**********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MGRAPCCDKA NVKKGPWSPQ EDTQLKHFIQ TYGTGGNWIS LPHKAGLKRC GKSCRLRWLN  60
YLRPNIKHGE FSAEEDRIIC TLFATIGSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36890.11e-52MYB family protein