PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023521433.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 274aa    MW: 31894.4 Da    PI: 10.1043
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023521433.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM101.31.4e-31131361128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lp+G+ F+Pt+eel+++yLk+k+ g+++ + ++ike+d+yk++P++Lp k  + +++ ew+fF  + +      +++r+t++g W++tg  ++++
  XP_023521433.1  13 LPVGCGFRPTEEELITHYLKNKILGQEFLV-RFIKEIDLYKFDPEQLPdKsYFPSSNFEWFFFRANTS------NNKRTTATGGWRSTGDPRRIK 100
                     799************************999.89***************53344445559*99987655......5689999************** PP

             NAM  94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++ ++e++ + ++ vf++g+  ++ kt+Wv+hey+l
  XP_023521433.1 101 AReTNEVIATCHIYVFHRGKGGNAIKTNWVIHEYKL 136
                     99667779999***********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MAAIDEFPFL SSLPVGCGFR PTEEELITHY LKNKILGQEF LVRFIKEIDL YKFDPEQLPD  60
KSYFPSSNFE WFFFRANTSN NKRTTATGGW RSTGDPRRIK ARETNEVIAT CHIYVFHRGK  120
GGNAIKTNWV IHEYKLHTLT DITSQPFIIF RLKKNAEERH VSIRDQEDGQ NSTVASHRTK  180
KVKRGGEIRE VRVSDMNILK RPYCVLAKSN FNKSCEVPHT IQTFFKVKRD KLDKKAEVGI  240
FVRYNTISKD YRVFQPHTSR VIVSQDVHFA GNEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.12e-32NAC family protein