PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023521506.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 229aa    MW: 25774.8 Da    PI: 5.0449
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023521506.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.4e-1966116155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +g+Wv+e+r+p   +k++r++lg++ tae+Aa+a++ a+++l+g
  XP_023521506.1  66 PVYRGVRRRN-KGKWVCELREP---NKKTRIWLGTYPTAEMAARAHDVAALALRG 116
                     68*****888.7*********8...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MDFFTQFSDP IPYYGNYNCK SESSSTLSDA GTPPHVVANS DEEVILASNR PKRRAGRRVF  60
KETRHPVYRG VRRRNKGKWV CELREPNKKT RIWLGTYPTA EMAARAHDVA ALALRGKSAC  120
LNFADSAWRF PIPSSNDPSV IREAAAKAAK ECEYEECNVS REEDDVILSQ PKAEPDQRDD  180
VDDEALSNMP MLLASMAEGP LLSPPRFCVR DDVGWDNVDT NDDVSLWSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.17e-51ERF family protein