PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023521534.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 92aa    MW: 10563.9 Da    PI: 4.4144
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023521534.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.35.4e-181390183
             NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeek.ewyfFskrdkkyatgkrknratksgyW 83
                    lp+Gf F+Pt+e+l+++yLk+k  g+++ +  +ike+d+yk+eP++Lp k++  +++ ew+fF  +          +r+t +g W
  XP_023521534.1 13 LPAGFVFRPTEEQLITHYLKNKNVGNECVV-GFIKEIDLYKLEPEQLPdKSFIPSDNfEWFFFRANTF------DIERTTGTGSW 90
                    799************************999.99***************6544344555**99987654......34667777777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MAAAAEFSCL SSLPAGFVFR PTEEQLITHY LKNKNVGNEC VVGFIKEIDL YKLEPEQLPD  60
KSFIPSDNFE WFFFRANTFD IERTTGTGSW NF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.12e-20NAC family protein