PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023521960.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 151aa    MW: 17660.1 Da    PI: 9.6164
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023521960.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.31.8e-50131421128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lp+GfrFhPtdeel+++yLk+k+ g++  + + i++vdi+k+ePwdLp   + +++e+ew+fF+ +d ky++++r+nratk+gyWk+tgkd+++l
  XP_023521960.1  13 LPVGFRFHPTDEELINHYLKNKMLGRESLV-DYIRQVDICKHEPWDLPFlsNDHTSEQEWFFFAAQDLKYSNSRRSNRATKTGYWKSTGKDRKIL 106
                     79*************************777.99***************4334445788************************************* PP

             NAM  94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +  +++l+g+kktLvfy+gr ++g +t+Wv+hey+l
  XP_023521960.1 107 APrTKKLIGTKKTLVFYSGRVSNGIRTNWVIHEYQL 142
                     9867788***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MADCIVLPSG DLLPVGFRFH PTDEELINHY LKNKMLGRES LVDYIRQVDI CKHEPWDLPF  60
LSNDHTSEQE WFFFAAQDLK YSNSRRSNRA TKTGYWKSTG KDRKILAPRT KKLIGTKKTL  120
VFYSGRVSNG IRTNWVIHEY QLHSDPQFAQ L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10490.13e-52NAC family protein