PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023522038.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 404aa    MW: 43959.4 Da    PI: 6.8876
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023522038.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.75.5e-052923301255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  XP_023522038.1 292 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 330
                     7788899*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    
MESTANLHQL QDQLLVPPLP PSSSPSSSST IVPSFLDHGW TPNISLNNNN NNSCNYNTRV  60
LNGLSSSFPV RSDCGVKNTN SSMLLQDLGF QWNGVSSSGS FFSQFLHAGG KIKEEMLNSP  120
STNQDFHPFP STNHVKNNDS DLNDPSHKLF IKTLINGGDH TEPGEFFNKI YPSINVSDWN  180
LSSPPPPPPP PFSNSLDLNL QTPPDLFHSQ DSFGIFKQTL SDFHDQIHPP PSAAILPCIS  240
SKVTTPFSPE LTEPKRPCTC IEPTLNQPSP PPPPLKKSRL DSRASCPPFK VRKEKLGDRI  300
AALQQLVAPF GKTDTASVLM EAIGYIKFLQ NQVETLSVPY MKPSCNKTTG PTYRSPVEGG  360
HEGQLDRDLR SRGLCLVPLG CLSYVAGDGG GIWTPPGFNG GTSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.11e-51bHLH family protein