PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023522147.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

FAR1

Protein Properties

Length: 659aa MW: 76501 Da PI: 8.2307

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023522147.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.6	7.5e-22	96	172	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn+YA ++GF++r+ + +sk++g+it+r+fvCskeg+++++ r gC a +++k++++gkw+v++l++eHnH+l p XP_023522147.1 96 QFYNAYAANAGFRIRIGQLFRSKNSGSITSRRFVCSKEGFQHPS--------------RLGCGAFMRIKRHESGKWVVDRLKKEHNHDLEP 172 6*************************************9994..............789*************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 659 aa Download sequence
MWVIDLFHKD HNHHFEHDDG GETLPTFQVK APRSAKLTVN VSHRRKIHLF KDVEHAFSCS 60 SGIIDSKHLN ERGNVIPPRG EPCVGLEFNS ANEAYQFYNA YAANAGFRIR IGQLFRSKNS 120 GSITSRRFVC SKEGFQHPSR LGCGAFMRIK RHESGKWVVD RLKKEHNHDL EPQPDTQKRN 180 LIVSKRFTGE LNGGFEGKEP VNLNYGIVIK RTRENKIGSD WYPGLFEYFQ SKQAEDTGFF 240 YAVEVENSNC MSVFWADGRS RFSCSQFGDT IILDTSYRKS AYAVPFATFF GVNHHKQPVL 300 LACALIAEES VESFSWLFQT WLRAMSSCHP LSIIADQDKA IQQAVAQVFP RTLHCFSSWQ 360 IRKKEQDNLN MLDETFRFEY EKCIYQSQTA EEFDVGWNML VGKYGLKDNA WFKEMYIKRN 420 NWVPLFLRGT FFAGIPTTDN FESCFGAAFN AQTPLAEFIS RYEIGLERRR DEERKESLNS 480 LNLQGFLQTK EPVEEQCLRL YTHAVFKVFQ KELLHCYRYL GFKIYEEVAL SRYLVRRCEN 540 DNEKCVVTVI STNLTVNCSC KMFEYEGILC RHILRVFQIL GISEIPPRYI LHRWTRNAEY 600 GTLQDVDTDG GPQELKAVML WSLREAACKY IEAGATSLEK YKLAYEIMRE GGRKLRWQR

Sequence ? help Back to Top

Protein Sequence Length: 659 aa Download sequence

MWVIDLFHKD HNHHFEHDDG GETLPTFQVK APRSAKLTVN VSHRRKIHLF KDVEHAFSCS  60
SGIIDSKHLN ERGNVIPPRG EPCVGLEFNS ANEAYQFYNA YAANAGFRIR IGQLFRSKNS  120
GSITSRRFVC SKEGFQHPSR LGCGAFMRIK RHESGKWVVD RLKKEHNHDL EPQPDTQKRN  180
LIVSKRFTGE LNGGFEGKEP VNLNYGIVIK RTRENKIGSD WYPGLFEYFQ SKQAEDTGFF  240
YAVEVENSNC MSVFWADGRS RFSCSQFGDT IILDTSYRKS AYAVPFATFF GVNHHKQPVL  300
LACALIAEES VESFSWLFQT WLRAMSSCHP LSIIADQDKA IQQAVAQVFP RTLHCFSSWQ  360
IRKKEQDNLN MLDETFRFEY EKCIYQSQTA EEFDVGWNML VGKYGLKDNA WFKEMYIKRN  420
NWVPLFLRGT FFAGIPTTDN FESCFGAAFN AQTPLAEFIS RYEIGLERRR DEERKESLNS  480
LNLQGFLQTK EPVEEQCLRL YTHAVFKVFQ KELLHCYRYL GFKIYEEVAL SRYLVRRCEN  540
DNEKCVVTVI STNLTVNCSC KMFEYEGILC RHILRVFQIL GISEIPPRYI LHRWTRNAEY  600
GTLQDVDTDG GPQELKAVML WSLREAACKY IEAGATSLEK YKLAYEIMRE GGRKLRWQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	0.0	FAR1 family protein