PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023522171.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 261aa    MW: 29752.6 Da    PI: 8.6286
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023522171.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.59.3e-181498291
             NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdke 91
                    p+Gf F+Pt+e+l+++yLk+k  g+++ + ++ike+d+yk+eP++Lp k++  +++ ew fF  +          +r+t +g Wk++g+ ++
  XP_023522171.1 14 PAGFVFRPTEEQLITHYLKNKNVGNECVV-SFIKEIDLYKLEPEQLPeKSFIPSDNfEWSFFRANTF------DIERTTGTGSWKSSGEPRR 98
                    89************************999.89***************5433334455**99987655......56899**********9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MAAAAEFSCL SSFPAGFVFR PTEEQLITHY LKNKNVGNEC VVSFIKEIDL YKLEPEQLPE  60
KSFIPSDNFE WSFFRANTFD IERTTGTGSW KSSGEPRRSK GGYAIKTNWV IHEYKPHPVS  120
KTPSKHPFLI FRLKNENPDG EKKITQKPGA GTSENPDNAI QSVYDFEKHI TESVFGKQKN  180
NLDEMTSNKH EESDTLRLSF SILQAQEDST RTQIVNPPHP STKRIHHNST LPSLVYVAKA  240
LLGVVVLVMF AQDVLLYRYR R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54330.17e-24NAC family protein