PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023522255.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 201aa    MW: 23398.2 Da    PI: 9.3929
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023522255.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.21.3e-123687155
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    +r++h ++Er+RR+++N+ +  Lr+++P++   + ++ + a+i+  +++ +++L+
  XP_023522255.1 36 QRMTHIAVERNRRKQMNEYLCVLRSMMPSS---YTQRGDQASIVGGTIKLVRELE 87
                    79****************************...9***************999985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MVLGFESAVF QEDKLIGKRW GRRGKMVKKR EEIEKQRMTH IAVERNRRKQ MNEYLCVLRS  60
MMPSSYTQRG DQASIVGGTI KLVRELEQLV QWLEGKKQRH EHICYAGQDY SGESKVEVRV  120
IESYANIKIR AENRPKQLLK VALELHSLQL LILHVNVTTI HQMVFYCFSV KIEDGCELST  180
VGEITADVNQ MFQRILMEKG D
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13748RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22490.12e-53bHLH family protein