PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023522296.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 251aa MW: 28192.1 Da PI: 8.0952

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023522296.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.7	1.8e-12	64	115	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P + + + + a+i A++++k+L+ XP_023522296.1 64 QRMTHIAVERNRRKQMNEYLAVLRSLMPCS---YVHRGDQASIIGGAINFVKELE 115 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
KLPTNWEPSP EECSINQPLS VGALYPPMEV EQSPPSPPSP PPTTGRRKRR RTRNMKNKEE 60 IENQRMTHIA VERNRRKQMN EYLAVLRSLM PCSYVHRGDQ ASIIGGAINF VKELEQQLQF 120 IKAHKEPAAS SPFADFFSFP QFSTPATNST HDSASSNTQW AAGDIEVTMV DTHANLKILS 180 KKRPRQLLKM VAGFQSLRFS VLHLNVTTLD QMVLYSVSIK IEEGCELNTV DEIAAAVNQI 240 LLSIQEESAF S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	47	51	RKRRR
2	47	52	RKRRRT
3	65	76	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	2e-77	bHLH family protein