PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023522299.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB_related

Protein Properties

Length: 191aa MW: 22146 Da PI: 5.7864

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023522299.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52	1.6e-16	39	83	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eE el++++++ lG++ W+ Ia +++ gRt++++k++w+ + XP_023522299.1 39 RGSFTPEEVELILNLHNILGNR-WSIIAGKLP-GRTANDIKNYWNCH 83 89******************.*****.*********977 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
MRLVVEATVM DVVDKEGLNR CRKSCRLRWL NYLRPNIKRG SFTPEEVELI LNLHNILGNR 60 WSIIAGKLPG RTANDIKNYW NCHLSKKVNG HQGGDQKPNS TKWKPIQEES SKSKEKEYVE 120 DQNGEKQGIL IQNQNQNVPI VEQSGSIRME NIQMDYQFDQ EVVAMADGDG CNKRELWDDW 180 VSEMDLWIDS L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	3e-37	MYB family protein