PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023522314.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 203aa    MW: 23045.2 Da    PI: 9.7963
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023522314.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.83.7e-1160103447
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      WT +E++l++ + + +G+g+Wk+Ia+++ +++t  q+ s+ qk+
   XP_023522314.1  60 WTIDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHIQVASHAQKF 103
                      ******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MTFCAPSTYN NLSPLALAPT PMESTGFLSD VINFCSNNTR HVVAANNGRV SQSSKTRIIW  60
TIDEHKLFLV GMAIFGSGNW KSIANKVVLT KTHIQVASHA QKFSTRQQIP KEQRKRKSIH  120
DIDTVDPELL SEVYARLESQ PETRTRSRPP PPPPPPRPLL TNYSPSRMDP NPTQPYEYFN  180
NYVPNVEQLP PQPYFVHNQN IIH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1113118QRKRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.14e-23MYB family protein