PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023522466.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 186aa MW: 21694.4 Da PI: 10.405

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023522466.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.6	3.5e-51	9	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF Ptdeel+v+yL++kv+g++++l i+e+d+yk++Pw Lp k+ +ekewyfFs+rd+ky++g+r+nr++ +gyWkatg+dk + s XP_023522466.1 9 LPPGFRFFPTDEELLVQYLCRKVAGHHFSL-PLIAEIDLYKFDPWVLPGKALFGEKEWYFFSPRDRKYPNGSRPNRVAGTGYWKATGTDKIISS- 101 79***********************999.78***********8777899*****************************999998. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g++vg+kk Lvfy g+apkg+kt+W+mheyrl XP_023522466.1 102 EGKNVGIKKALVFYIGKAPKGTKTNWIMHEYRL 134 999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence
MDPLTQLILP PGFRFFPTDE ELLVQYLCRK VAGHHFSLPL IAEIDLYKFD PWVLPGKALF 60 GEKEWYFFSP RDRKYPNGSR PNRVAGTGYW KATGTDKIIS SEGKNVGIKK ALVFYIGKAP 120 KGTKTNWIMH EYRLIASSRK IGSSKVQQYN KFEPNILIIQ FFLLMGVFFF FFSFLLFGFC 180 EVRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52890.1	1e-93	NAC family protein