PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023522473.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 172aa    MW: 19217.5 Da    PI: 9.4455
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023522473.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA572.6e-18124158133
            GATA   1 Cs..nCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 
                     C+  nC+t  Tp+WR+gp g+k+LCnaCG++yrk+
  XP_023522473.1 124 CTnyNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE 158
                     55559****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MVNNNHGLAS SGGRSGEMMS EANYNPHQIV WSKELKTYVL KSNNFGQLHP SLYCNTYPAK  60
TIGSTANSMA NLPLQNYNND QYTLLNPACR KTDDHEAEAS SGGGRRRGLQ RRRVSACNEV  120
ERRCTNYNCN TNFTPMWRKG PLGPKSLCNA CGIRYRKEIM NKEAVAAENN HG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20750.12e-16GATA family protein