PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023522654.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 154aa    MW: 17572.3 Da    PI: 9.6842
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023522654.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.97.4e-1363114155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r++h ++Er+RR+++N+ +  Lr+++P++   + ++ + a+i+  +++ +++L+
  XP_023522654.1  63 QRMTHIAVERNRRKQMNEYLCVLRSMMPSS---YTQRGDQASIVGGTIKLVRELE 114
                     79****************************...9***************999985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MVLGLESAVF QEDKLIGCGW KNVEAMEAGE FVGGGLRATV APVGKRWGRR GKMVKKREEI  60
EKQRMTHIAV ERNRRKQMNE YLCVLRSMMP SSYTQRGDQA SIVGGTIKLV RELEQLVQWL  120
EGKKQRHEHI CYAGQDYSGE SKVEVRVIES YANI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16475RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22490.11e-33bHLH family protein