PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023522658.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

FAR1

Protein Properties

Length: 464aa MW: 54745.4 Da PI: 8.1457

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023522658.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	88.3	1.1e-27	48	134	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY+eYAk++GF++++++s++sk+++e+++++f Cs++g + e+++ ++r+ ++++t+Cka+++vk++ dg+w ++++ ++HnHel p XP_023522658.1 48 FYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGVTPESESG---NSRRPSVKKTDCKASMHVKRRPDGRWIIHEFIKDHNHELLP 134 *************************************9998877...7788899*****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MVDVVDEMHD RDGGIISIPK KDTLFEEDID FEPHNGIEFE SHEAAYTFYQ EYAKSMGFTT 60 SIKNSRRSKK SKEFIDAKFA CSRYGVTPES ESGNSRRPSV KKTDCKASMH VKRRPDGRWI 120 IHEFIKDHNH ELLPALAYHF RIHRNVKLAE KNNIDILHAV SERTRRMYVE MSKKCGGHRN 180 FSFPQINTSY QFDKGRYLAL DEGDAQILLE YFKRIQKENP DFFYAIDLNE EQRLRNLFWV 240 DAKSRSDYVS FTDVVSFDIS YIKTNDKLPF APFIGANHHA QSMILGCALA ADWTKPTFTW 300 LLKTWLRAMG GKAPKVIISD QDKALKLAIE EVFPNTRHCF ALWHILEKIP ETLAHVIKRN 360 ENFLAKFNKC IFKSWSDEQF DMRWWKMVTR FELQDDEWIQ SLYDDRKKWV PTYMEDIFLA 420 GMSTAQRSDS MNAFFDKYIH KKITLKEFLK QYGIILQNRY EEEA

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MVDVVDEMHD RDGGIISIPK KDTLFEEDID FEPHNGIEFE SHEAAYTFYQ EYAKSMGFTT  60
SIKNSRRSKK SKEFIDAKFA CSRYGVTPES ESGNSRRPSV KKTDCKASMH VKRRPDGRWI  120
IHEFIKDHNH ELLPALAYHF RIHRNVKLAE KNNIDILHAV SERTRRMYVE MSKKCGGHRN  180
FSFPQINTSY QFDKGRYLAL DEGDAQILLE YFKRIQKENP DFFYAIDLNE EQRLRNLFWV  240
DAKSRSDYVS FTDVVSFDIS YIKTNDKLPF APFIGANHHA QSMILGCALA ADWTKPTFTW  300
LLKTWLRAMG GKAPKVIISD QDKALKLAIE EVFPNTRHCF ALWHILEKIP ETLAHVIKRN  360
ENFLAKFNKC IFKSWSDEQF DMRWWKMVTR FELQDDEWIQ SLYDDRKKWV PTYMEDIFLA  420
GMSTAQRSDS MNAFFDKYIH KKITLKEFLK QYGIILQNRY EEEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein