PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023522703.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family AP2
Protein Properties Length: 187aa    MW: 20939.5 Da    PI: 9.9733
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023522703.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2569.7e-1873132155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+GV++++++gr++A+++d  ++n+   k+ k+++lg ++ +e Aa+a++ a++k++g
  XP_023522703.1  73 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDEEEAAARAYDLAALKYWG 132
                     57*******************766644468557*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MASSSSDPAF KHEPGASCAA AAGGGTPESS EVVMANDQLL LYRGFKKAKK ERGCTAKERI  60
SKMPPCAAGQ RSSIYRGVTR HRWTGRYEAH LWDKSTWNQN QNKKGKQVYL GAYDEEEAAA  120
RAYDLAALKY WGPGTLINFP VTDYTRDLEE MQTVSREEYL ASLRRKSSGF SRGISKYRGL  180
SRFFPPH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.12e-87AP2 family protein