PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023522776.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 244aa MW: 27326.1 Da PI: 5.1167

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023522776.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.6	5.6e-38	34	92	4	62
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +a +cprC s+ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rk+++++ XP_023522776.1 34 TAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRTR 92 5679***************************************************9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MFSTAMSDHH QLPPPPPPPF ASHLERKWKP HLETAPNCPR CASANTKFCY YNNYSLSQPR 60 YFCKSCRRYW TKGGSLRNVP VGGGCRKSRR TRSSRSSTVS RSTNPNTCTQ ITESSSNGPD 120 IDLAAVFARY LNTAPPSTEA HALTSSPESV DPLENCEILF EGLSDLLIEE ENQAQEQKQG 180 IMGNYENTPF GLHAELGVEE EVWASQQIQE LDSFSCNYNA NQFCEVGDNW SSFDFAAVNN 240 VEYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21340.1	6e-43	Dof family protein