PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023522820.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 148aa MW: 17170.9 Da PI: 9.7716

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023522820.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.4	4.7e-56	17	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv ++++++ +i e+d++k+ePwdLp ++k +ekewyfF+ +d+ky+tg r+nrat+sgyWkatgkdke+++ XP_023522820.1 17 LPPGFRFHPTDEELITHYLSPKVLNTNFTA-VAIGEADLNKSEPWDLPGRAKMGEKEWYFFCVKDRKYPTGLRTNRATDSGYWKATGKDKEIFR- 109 79***********************999.67***********99999*************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ vg+kktLvfy+grapkg+k++Wvmheyrl XP_023522820.1 110 AKRIVGMKKTLVFYTGRAPKGHKSNWVMHEYRL 142 9999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 148 aa Download sequence
MCVCVHMNSI MDEQIELPPG FRFHPTDEEL ITHYLSPKVL NTNFTAVAIG EADLNKSEPW 60 DLPGRAKMGE KEWYFFCVKD RKYPTGLRTN RATDSGYWKA TGKDKEIFRA KRIVGMKKTL 120 VFYTGRAPKG HKSNWVMHEY RLAPKFPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G29035.1	4e-82	NAC family protein