PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023522876.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WOX
Protein Properties Length: 147aa    MW: 16796.7 Da    PI: 9.3572
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023522876.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox69.63.8e-222282257
                    T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    r+R+t+++ ql++Le+ Fe+ n +ps+++++e++++l    +++e++V++WFqNrRa+ k+
  XP_023522876.1 22 RQRWTPSPVQLQILERIFEQgNGTPSKQKIKEITSELgqhgQISESNVYNWFQNRRARSKR 82
                    89*****************99**************************************97 PP
2Wus_type_Homeobox100.21.6e-322184265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       +r+RWtP+p Q++iLe+++++G  tP+k++i++it+eL ++G+i++ NV++WFQNr+aR+++kq
     XP_023522876.1 21 SRQRWTPSPVQLQILERIFEQGNGTPSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQ 84
                       789***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MRLGSVYYEP LMASSSHKIT SRQRWTPSPV QLQILERIFE QGNGTPSKQK IKEITSELGQ  60
HGQISESNVY NWFQNRRARS KRKQQGTAPA YGESELDTEV ESPKDKKTKP VDFQTPQTSA  120
PLGENMGFQS PEMHYELHFL DPNTNKA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17684RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.16e-50WOX family protein