PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023522988.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 175aa    MW: 19649.1 Da    PI: 8.4583
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023522988.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.6e-183685255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  XP_023522988.1 36 LYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 85
                    69****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MSATQPSQIT QPSSSDTNAQ SNPNNKRVRD SSKHPLYRGV RMRAWGKWVS EIREPRKKSR  60
IWLGTFPTPE MAARAHDVAA LSIKGNSAIL NFPELAHSLP RPVSFAPRDV QAAAAKAAHM  120
DPFQYSTDDS DELSEIVKLP SLTTNYLNNE FVLMDSTDGW VYPPPWLRTM DDCSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.17e-72ERF family protein