PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023523049.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 145aa    MW: 17102.7 Da    PI: 10.1719
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023523049.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding582.2e-181760146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     r ++++eE+e+l +a++ +G++ W+ Iar ++ gRt++ +k++w+ 
   XP_023523049.1 17 RRAFSEEEEERLMQAHRIYGNK-WAMIARLFP-GRTDNAVKNHWHV 60
                     678*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
KSCRLRWFNQ LDPRINRRAF SEEEEERLMQ AHRIYGNKWA MIARLFPGRT DNAVKNHWHV  60
IMARKYREHS RCYRRRKLTQ SVYTKMDQDL SFLKHHNMPN FQASIGAVDY AFLTQMPIAG  120
AEAMPCDTPF FTSCAHLSNL NVLPG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26780.11e-50MYB family protein