PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023523053.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 185aa    MW: 20872.9 Da    PI: 10.2831
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023523053.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.32.3e-1988138256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p +   r r++lg+++tae Aa a+++a+ kl+ge
  XP_023523053.1  88 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDRAAYKLRGE 138
                     59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
LLLSRQSTNT LDSIFSYCLP SAAAAAAPVL EPALGSSVYL RQRDLVHQFC VENHHGCSSP  60
NLQHQQRDHP VGISVGYGGF PGAVKKKLYR GVRQRHWGKW VAEIRLPQNR MRVWLGTYDT  120
AEAAAYAYDR AAYKLRGEYA RLNFPNLKDF RNLGFADCSR LNALKHSVDA KIQAICLKMK  180
RERGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.11e-50ERF family protein