PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023523110.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family LBD
Protein Properties Length: 130aa    MW: 14190.9 Da    PI: 5.099
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023523110.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26077.62.1e-2427032100
          DUF260  32 nvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
                      vhk+FGasnv+k+l+++pee+red+++sl+yeAear+rdPvyG++g i  lq ++++l+++lal+k++
  XP_023523110.1   2 KVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKAR 70 
                     69**************************************************************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
AKVHKVFGAS NVSKILTEVP EEQREDTVNS LAYEAEARLR DPVYGCIGAI ALLQTKMAEL  60
QHDLALAKAR LARYAAANNN YSSSTSLGVL ENCVVNMSYG GLSFSGQSSD DISQYGYLCD  120
FTHFPYPFQA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11090.12e-34LBD family protein