PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023523216.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 252aa    MW: 28569.2 Da    PI: 6.9908
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023523216.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.46.1e-09162209455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++iN+++  L+ l+P +    ++ +   ++L +++ Y++sLq
  XP_023523216.1 162 SHSLAERVRREKINNKLKCLQNLVPGC----HETMGMTMVLDETITYVHSLQ 209
                     8*************************9....7888889***********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MIEFRQDLHH FKSSKASEER GLNMEVINQF PNMTESMLED FNQTDFSEEN FLGYHFQLSE  60
NTTRSSISDF PRLALFKCQS EFPVITRSSP LVDSSQETMN RKAEQVLVSF SGTPCAAFGN  120
NCSVARNLKN LGGRKRRKCE KEQEKPAEVV HIRAKRGEAT HSHSLAERVR REKINNKLKC  180
LQNLVPGCHE TMGMTMVLDE TITYVHSLQN QVEFLSMELA TACSTLGINS GMGATRKASQ  240
GTRSHEEQEE EK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.15e-38bHLH family protein