PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023523219.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 240aa    MW: 27440.2 Da    PI: 7.5742
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023523219.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.55.6e-09140187455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++iN+++  L+ l+P +    ++ +   ++L +++ Y++sLq
  XP_023523219.1 140 SHSLAERVRREKINNKLKCLQNLVPGC----HETMGMTMVLDETITYVHSLQ 187
                     8*************************9....7888889***********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MIEFRQDLHH FKSSKASEER GLNMEVINQF PNMTESMLED FNQTDFSEEN FLGYHFQLSE  60
NTTRSSISDF PRLALFKCQS EFPVITRSSP LVDSSQETMN RKAEQVLNLG GRKRRKCEKE  120
QEKPAEVVHI RAKRGEATHS HSLAERVRRE KINNKLKCLQ NLVPGCHETM GMTMVLDETI  180
TYVHSLQNQV EFLSMELATA CSTLGINSGM GATRKASVIQ QLPERVLTFD ILLSNIKNKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.12e-37bHLH family protein