PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023523279.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 237aa    MW: 27002.5 Da    PI: 4.2977
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023523279.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY971.3e-3068125359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d+++++itY+++Hnh+
  XP_023523279.1  68 DFWSWRKYGQKPIKGSPYPRGYYRCSTTkGCSAKKQVERCKTDGSMFIITYTSTHNHP 125
                     99***********************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MELSSVHSLS PKPNPDDDND TNLSTQLIPE ATSKKRKVLQ KTVVTVKIGS KKAAIGVGKM  60
KNEGPPPDFW SWRKYGQKPI KGSPYPRGYY RCSTTKGCSA KKQVERCKTD GSMFIITYTS  120
THNHPGPNIS TLNLDQTQEQ IQPQPLDQGQ NQDVHPNQGL EKQDQDQSDE EEEEELSMEE  180
EEEEEEEEEE EEEEEKANKT EVENHDHFFD ELEELPSPQP FSSYFFDEIR LISAAPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13461KKRKVLQKTVVTVKIGSKKAAIGVGKMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.25e-34WRKY family protein