PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023523301.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

FAR1

Protein Properties

Length: 668aa MW: 76638.8 Da PI: 5.4745

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023523301.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.2	2.1e-21	60	142	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+ YAke GF vr+s++ ++ +++e ++ ++ Cs g++++++ + r+r+etrtgC a++k +++++ +w+++++el+HnH ++ XP_023523301.1 60 FYSCYAKEQGFGVRVSNTWYR-KSKERYRGKLSCSSAGFKKKSEAN-----RPRPETRTGCPAMIKFRLMDTRRWRIIEVELDHNHLIN 142 9*************99997.66779**********99888.....*********************************775 PP

Sequence ? help Back to Top
Protein Sequence Length: 668 aa Download sequence
MDGVSLNTDP VGDEEADYFE IEGDSVLADY VDQTGMFQGE NPLPPAVGME FESYEDVYYF 60 YSCYAKEQGF GVRVSNTWYR KSKERYRGKL SCSSAGFKKK SEANRPRPET RTGCPAMIKF 120 RLMDTRRWRI IEVELDHNHL INPTSGKFYK SHKNLGVGTK RLLQLDSAEE VQKVRLFRTV 180 VVDADHNGFL DVDEGEFGNS VDDSNQLKFN EGDAVAVEDF LCQAQLTDSN FFYVVDLNEK 240 GSLMNLFWVS SRSKAAYNYF GDVVYIDTSC LANKYEVPLV SIIGINHHGQ SVLFGCGLLA 300 MEAAESYIWL FRAWLTSILG RPPQVIIADQ CVALQIALAD VFPRASHCIS LSDIMRKVPQ 360 KLGSLLEYEE IETAICKAVY HSSKPEQFEA VWEGMVQQHM LGDHKWLQAI YEDRRRWVPV 420 FVKDVFLAGV LSIQSSDTVS CFFQEYLGVH TSLREFLAKY DRALQSRYQL EALADADSKS 480 SSFMLRSRCY FELQISKLYT NEILKKFERE VEGMYSCFST RKLNAEGSLV TYIVKEHVEM 540 EGNRRDARDF EVLYNESEME VQCNCGLFNS KGYLCRHTLS VLNQNGIEEI PPQYILPRWR 600 KDVKRSYVLD YSCRGIDINS QIHRYDNLYR SIVQVIEEGR KSKERYDIAI QGINDILSKL 660 RLGTNPSS

Sequence ? help Back to Top

Protein Sequence Length: 668 aa Download sequence

MDGVSLNTDP VGDEEADYFE IEGDSVLADY VDQTGMFQGE NPLPPAVGME FESYEDVYYF  60
YSCYAKEQGF GVRVSNTWYR KSKERYRGKL SCSSAGFKKK SEANRPRPET RTGCPAMIKF  120
RLMDTRRWRI IEVELDHNHL INPTSGKFYK SHKNLGVGTK RLLQLDSAEE VQKVRLFRTV  180
VVDADHNGFL DVDEGEFGNS VDDSNQLKFN EGDAVAVEDF LCQAQLTDSN FFYVVDLNEK  240
GSLMNLFWVS SRSKAAYNYF GDVVYIDTSC LANKYEVPLV SIIGINHHGQ SVLFGCGLLA  300
MEAAESYIWL FRAWLTSILG RPPQVIIADQ CVALQIALAD VFPRASHCIS LSDIMRKVPQ  360
KLGSLLEYEE IETAICKAVY HSSKPEQFEA VWEGMVQQHM LGDHKWLQAI YEDRRRWVPV  420
FVKDVFLAGV LSIQSSDTVS CFFQEYLGVH TSLREFLAKY DRALQSRYQL EALADADSKS  480
SSFMLRSRCY FELQISKLYT NEILKKFERE VEGMYSCFST RKLNAEGSLV TYIVKEHVEM  540
EGNRRDARDF EVLYNESEME VQCNCGLFNS KGYLCRHTLS VLNQNGIEEI PPQYILPRWR  600
KDVKRSYVLD YSCRGIDINS QIHRYDNLYR SIVQVIEEGR KSKERYDIAI QGINDILSKL  660
RLGTNPSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein