PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023523396.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 258aa MW: 29540.7 Da PI: 9.7534

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023523396.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173	8.8e-54	19	147	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLkkk+++++l++ +i++vd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nrat+sgyWkatg++k+v+++ XP_023523396.1 19 LPPGFRFHPTDEELVVHYLKKKATSQPLPA-AIIADVDLYKYDPWELPAKANYGEQEWYFFSPRDRKYPNGARPNRATASGYWKATGTNKPVIAS 112 79**************************.88***********999999***********************************99 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +vg+kk L+fy+g++pkg kt+W+mheyrl XP_023523396.1 113 leGNPKVGVKKALIFYHGKSPKGIKTNWIMHEYRL 147 877888*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MNMEKLKSAP EADSERPNLP PGFRFHPTDE ELVVHYLKKK ATSQPLPAAI IADVDLYKYD 60 PWELPAKANY GEQEWYFFSP RDRKYPNGAR PNRATASGYW KATGTNKPVI ASLEGNPKVG 120 VKKALIFYHG KSPKGIKTNW IMHEYRLVDY KHDRGKKNSL RLDDWILCRI YKKPNSNKLG 180 MDHEQEDSSN YVAEQTPPTT VTTIFSVYPE LASSFLPTKR MLLRSPLWDD EQPSSKRLQL 240 MEGGSDNSIA PLLSQLRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	3e-90	NAC family protein