PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023523511.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 255aa    MW: 27520.5 Da    PI: 7.7112
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023523511.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2140.0001590112123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ykC+ C+k Fs+   L  H  +H
  XP_023523511.1  90 YKCSVCDKAFSSYQALGGHKASH 112
                     9***********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MALEALNSPT TPSPALHYDD PSLNSLESWS KRKRTKRPRG FDNPPTEEEY LALCLIMLAR  60
GGATASDPDH RLAYEVPIPA QPISVVKLSY KCSVCDKAFS SYQALGGHKA SHRKSATGED  120
HSTSSTITTS ATATTAVGGG KSHECSICHK SFPTGQALGG HKRCHYDGGI GNNNNNNHHN  180
QTHSHNNNHT VTSSEGVGST HTQSHSHRDF DLNLPALPEL SPGFFINSGD EEVQSPLPLK  240
KPRILTIPKV EITQT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.18e-61C2H2 family protein