PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023523641.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 226aa    MW: 24287.8 Da    PI: 9.8159
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023523641.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.78.1e-2062111255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp     + +r++lg+f+tae Aa+a++ a+++++g
  XP_023523641.1  62 RYRGVRQRP-WGKWAAEIRDPQ----KaTRVWLGTFDTAEAAARAYDGAALRFRG 111
                     7********.**********93....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MWGRGIGNGY SGGRIVDFGA VQSYWEPSVS ICGGSNSSNT ISAATGTRTP AAISGEENPR  60
RRYRGVRQRP WGKWAAEIRD PQKATRVWLG TFDTAEAAAR AYDGAALRFR GSKAKLNFPE  120
FVTVLPPSSQ PNAHWAPSPV AAPPLQPTGF GNYLQYSYFP QNSGEFPEQV LCNSPFVNPP  180
SGASNFAFPF SEQQRRLFRA PENEMNGGSG SGGASSFGYR PPAGDG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.18e-21ERF family protein