PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023523643.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 231aa    MW: 24343.2 Da    PI: 9.0931
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023523643.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.4e-20148197255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp     + +r++lg+f+tae Aa+a++ a+++++g
  XP_023523643.1 148 RYRGVRQRP-WGKWAAEIRDPQ----KaTRVWLGTFDTAEAAARAYDGAALRFRG 197
                     7********.**********93....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MCYFKVAKQG AGGDVPEAIF SSAGEIITMV SALTHVISSG APPGYGGAGD LSGVGYSSGF  60
APPATTVAEG GGCRKREREE EGESGIMWGR GIGNGYSGGR IVDFGAVQSY WEPSVSICGG  120
SNSSNTISAA TGTRTPAAIS GEENPRRRYR GVRQRPWGKW AAEIRDPQKA TRVWLGTFDT  180
AEAAARAYDG AALRFRGSKA KLNFPEFVTV LPPSSQPNAH WAPSPFIMIY V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.12e-20ERF family protein