PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023524257.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 365aa MW: 41663.4 Da PI: 6.0259

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023524257.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.8	2.1e-09	292	327	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ XP_023524257.1 292 YKWPYPSETEKVALAESTGLDQKQINNWFINQRKRH 327 5679*****************************885 PP
2	ELK	31.1	5.1e-11	247	268	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrKYsg L+sLkqE+s XP_023524257.1 247 ELKNHLLRKYSGFLSSLKQELS 268 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MEDYNNHLNE NSNPRGNFLY ASANSSSGNY GRSSNPTAQM AAHTFHLQQG ADCFQPEQSH 60 PIVKSEASSS HHQLLKFHYS LGQPPPPTTT TCRPDDDGGV DVEAIKAKIM AHPQYSSLLE 120 AYMECQKVGA PPQVVEQLVA ARQEFEARQR SSMVSGDSTK DPELDQFMEA YYDMLVKYRE 180 ELTRPVQEAM DFMRRIESQL SSLCNGPVRI FNSDEKCEGI GSSEEEQENS GGETELPEID 240 PRAEDRELKN HLLRKYSGFL SSLKQELSKK KKKGKLPKDA RQKLLNWWEL HYKWPYPSET 300 EKVALAESTG LDQKQINNWF INQRKRHWKP SEDMQFMVMD GLHPSNAALY LDGHYMTDGH 360 YRLGP

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MEDYNNHLNE NSNPRGNFLY ASANSSSGNY GRSSNPTAQM AAHTFHLQQG ADCFQPEQSH  60
PIVKSEASSS HHQLLKFHYS LGQPPPPTTT TCRPDDDGGV DVEAIKAKIM AHPQYSSLLE  120
AYMECQKVGA PPQVVEQLVA ARQEFEARQR SSMVSGDSTK DPELDQFMEA YYDMLVKYRE  180
ELTRPVQEAM DFMRRIESQL SSLCNGPVRI FNSDEKCEGI GSSEEEQENS GGETELPEID  240
PRAEDRELKN HLLRKYSGFL SSLKQELSKK KKKGKLPKDA RQKLLNWWEL HYKWPYPSET  300
EKVALAESTG LDQKQINNWF INQRKRHWKP SEDMQFMVMD GLHPSNAALY LDGHYMTDGH  360
YRLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-131	TALE family protein