PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023524386.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 203aa    MW: 22490.6 Da    PI: 4.5962
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023524386.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-182170255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +ykGVr +k +g+Wv+eIr p++   r r++lg+++ +e+Aa+a +aa  +l+g
  XP_023524386.1 21 KYKGVRKRK-WGKWVSEIRLPNS---RDRIWLGSYDKPEQAARAFDAAQFCLRG 70
                    8*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MADRRNSGSE TNEESGGQIL KYKGVRKRKW GKWVSEIRLP NSRDRIWLGS YDKPEQAARA  60
FDAAQFCLRG PHAKFNFSDS PPEIDGGDRL SAQEIQAAAA KFAVEHGGEE RVKTGSSSSN  120
EEAVTGKQCS GAVDSGDGSS VWAAWDLLDG GSDFGFGNIM CRNEMVYDSD IIFPGQENME  180
DRFVDGGEYF CHEANFLWNF DNH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12329KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.19e-38ERF family protein