PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023524388.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 195aa    MW: 21723.2 Da    PI: 7.6443
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023524388.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA31.91.9e-10155174120
            GATA   1 CsnCgttkTplWRrgpdgnk 20 
                     Cs C+tt+TplWR+gp+g+k
  XP_023524388.1 155 CSDCNTTTTPLWRSGPQGPK 174
                     ******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MNSLYPLMAK HEEHEEHEEQ HPDLKLYIFP STSQVAAASS HLAFATCFTS SATQHDHQRM  60
DLHHHQNQGE KSIDGSRTDI DHQEQQLDEY QIKKGDNGSA AKYWMSSKMR LMQKMMKVGG  120
GNSDQAAAAA VAAAGRRSNN NEGRSCCSSN GVRVCSDCNT TTTPLWRSGP QGPKVIPLLY  180
LTNYFNFTVP KPQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.13e-13GATA family protein