PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023524391.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 192aa    MW: 21430.3 Da    PI: 9.3246
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023524391.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.8e-18654254
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
                    +++GVr++  +g+Wv+eIr+p        +r++lg+f+tae+Aa+a+++a   ++
  XP_023524391.1  6 KFRGVRQRQ-WGSWVSEIRHP-----LlkRRVWLGTFDTAEDAARAYDQASILMN 54
                    89****999.**********8.....334********************976665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MVYSRKFRGV RQRQWGSWVS EIRHPLLKRR VWLGTFDTAE DAARAYDQAS ILMNGQNAKT  60
NFPASKDRSE SHGHGASPLS PKALSELLST KLKKCCKNPS PSLTCLRLDS DNAHIGVWQK  120
RAGTRAASDW VMRIELGKKE TPSPSMPLSP LPEPASQEAE GRQNGIDEED RIAMQMIEEL  180
LSWNCPLPST SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25390.22e-78ERF family protein