PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023524575.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

C2H2

Protein Properties

Length: 165aa MW: 18452.3 Da PI: 8.9439

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023524575.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.3	0.0011	62	84	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs+ L H +H XP_023524575.1 62 FVCKTCNREFSSFQALGGHRTSH 84 89**********99998888777 PP
2	zf-C2H2	11.4	0.001	101	123	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+Cg F+ L H+r+H XP_023524575.1 101 HECPICGLDFPIGQALGGHMRRH 123 79*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence
MKREREGGEF EVLDMVDCLM LLSRMEEPRR KNDCLMLLSK MEEPRRKNGF SPTPAADSDK 60 IFVCKTCNRE FSSFQALGGH RTSHTKPNFN ANGPPTKSKA HECPICGLDF PIGQALGGHM 120 RRHRNTAAAA AVLKKSDGCG KRIFELDLNL PPLENNLNLK LQLSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59820.1	3e-32	C2H2 family protein