PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023524628.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 826aa MW: 91430 Da PI: 6.5094

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023524628.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.6e-09	623	660	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gL+ +qV++WF N R + XP_023524628.1 623 FEHflHPYPTDTDKHMLATQTGLSRNQVSNWFINARVR 660 564459******************************87 PP
2	BELL	114.9	4.1e-37	480	548	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e q+kkakLl +leeV++rYkqy++q+q+v+ssFe vagl sa+pY+slAlk++SrhFrcLk+ai+eq+ XP_023524628.1 480 EYQQKKAKLLYILEEVCRRYKQYHQQMQMVVSSFESVAGLSSATPYISLALKTVSRHFRCLKNAISEQL 548 88*****************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 826 aa Download sequence
MEHSYGFEQH VAQQSRRDKL RVPQNYLRVV GELSSNSGEQ LGFQNSEHSG LDLDLVRIQS 60 FNKNAILPHD LSSFPAEMIN FSRDSNVLSD QRHIMLRQEP EDPAQCSRQI LADASLGSFA 120 NSLLKASGEI MNNSLGDWVV NCGSNSLGGE MLNEEVTDST VYSLKPTCIG FQTSTSFNNP 180 SNEAFIQDGQ KRVAGELHLP PIYQNSLQGV TSASIGTQDM EMTSIVQHNF TEINQTGSCE 240 GSGNELALLP VYRDQPNVLP YDSTGSWTDR TFYNCRSWTG ELGSIARKTG QELRTFMSDS 300 NPQGLSLSLS SNPPSKLPTA QFEESEELQE NMTVLKNPQE SKSGKSESFC RLPNPTSIGN 360 KNHGKSLQDA MGAPMNTYRN TGPLGPFTGY ATILKSSKFL KPAQLLLDEF CGSNGQKFVQ 420 PYEVFEKTSG EVGPSAVHSA FRNEVVKENS SCAEASTFCG SNETNVSGVG SISSESHQPE 480 YQQKKAKLLY ILEEVCRRYK QYHQQMQMVV SSFESVAGLS SATPYISLAL KTVSRHFRCL 540 KNAISEQLKY LRKVLGEDLP SPSAGTSGSK GDANSARLKY MEQSFQKQKS GMVNMGFLES 600 QHVWRPQRGL PERAVAILRA WLFEHFLHPY PTDTDKHMLA TQTGLSRNQV SNWFINARVR 660 VWKPMVEEIH MLETKGMAEM NNKSHGTKDG SSTIENTAGW ISSEQQPLKN HGVVNEIASH 720 HLQCLGVDSS SGDRNGVGSS NQQCDQDKQS KLDQGIQSNM EGELMGFMPY RASPAEVGGL 780 GSVSLTLGLR HRVESAHHQQ QHHQLQQQDD QLIRHYGGQM IHDFVG

Sequence ? help Back to Top

Protein Sequence Length: 826 aa Download sequence

MEHSYGFEQH VAQQSRRDKL RVPQNYLRVV GELSSNSGEQ LGFQNSEHSG LDLDLVRIQS  60
FNKNAILPHD LSSFPAEMIN FSRDSNVLSD QRHIMLRQEP EDPAQCSRQI LADASLGSFA  120
NSLLKASGEI MNNSLGDWVV NCGSNSLGGE MLNEEVTDST VYSLKPTCIG FQTSTSFNNP  180
SNEAFIQDGQ KRVAGELHLP PIYQNSLQGV TSASIGTQDM EMTSIVQHNF TEINQTGSCE  240
GSGNELALLP VYRDQPNVLP YDSTGSWTDR TFYNCRSWTG ELGSIARKTG QELRTFMSDS  300
NPQGLSLSLS SNPPSKLPTA QFEESEELQE NMTVLKNPQE SKSGKSESFC RLPNPTSIGN  360
KNHGKSLQDA MGAPMNTYRN TGPLGPFTGY ATILKSSKFL KPAQLLLDEF CGSNGQKFVQ  420
PYEVFEKTSG EVGPSAVHSA FRNEVVKENS SCAEASTFCG SNETNVSGVG SISSESHQPE  480
YQQKKAKLLY ILEEVCRRYK QYHQQMQMVV SSFESVAGLS SATPYISLAL KTVSRHFRCL  540
KNAISEQLKY LRKVLGEDLP SPSAGTSGSK GDANSARLKY MEQSFQKQKS GMVNMGFLES  600
QHVWRPQRGL PERAVAILRA WLFEHFLHPY PTDTDKHMLA TQTGLSRNQV SNWFINARVR  660
VWKPMVEEIH MLETKGMAEM NNKSHGTKDG SSTIENTAGW ISSEQQPLKN HGVVNEIASH  720
HLQCLGVDSS SGDRNGVGSS NQQCDQDKQS KLDQGIQSNM EGELMGFMPY RASPAEVGGL  780
GSVSLTLGLR HRVESAHHQQ QHHQLQQQDD QLIRHYGGQM IHDFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	5e-88	TALE family protein