PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023525029.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 94aa    MW: 10774 Da    PI: 7.686
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023525029.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.32e-09652347
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     +WT+   + + +a + +  +   +W+  ar +g g+t++++k ++ ++
   XP_023525029.1  6 KWTAKQNKMFENALAIYDRDtpeRWNNLARAVG-GKTAEEVKRHYENL 52
                     8*****************99*************.***********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MASGSKWTAK QNKMFENALA IYDRDTPERW NNLARAVGGK TAEEVKRHYE NLVEDVNKIE  60
SGQVPFPAYT KSEPAGTGFR FVDEEQRMRS LQLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.16e-37MYB_related family protein