PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023525317.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB

Protein Properties

Length: 251aa MW: 28255.9 Da PI: 5.6511

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023525317.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.9	1.5e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ + G +W+++++ g+ R++k+c++rw +yl XP_023525317.1 14 KGPWTAEEDKKLINFILSNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	50.7	4e-16	74	111	8	47
HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 E++ +d+++qlG++ W++Ia++++ gRt++++k++w+++ XP_023525317.1 74 EEKMVIDLHAQLGNR-WSKIASHLP-GRTDNEIKNHWNTH 111 999**********.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MGRQPCCEKV GLKKGPWTAE EDKKLINFIL SNGQCCWRAV PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGLL SDFEEKMVID LHAQLGNRWS KIASHLPGRT DNEIKNHWNT HIKKKLRKMG 120 IDPQTHKPIS SPTVQLQPDV ERSSNSLVVT DVEEEQATTC MNVIESQAIL DPCIPSSSSS 180 SSSSSSPSTS NPIGFEDLKL PDFDWLYCND MSNNGSDVGF WEDDFSSWDF LVGHEDGEVP 240 IFQESWPCGL L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66230.1	3e-91	MYB family protein