PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023525380.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

DBB

Protein Properties

Length: 270aa MW: 28988.2 Da PI: 4.6459

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023525380.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	24.8	4.6e-08	4	34	5	35
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHk 35 C+ +++ e+ lfC+ ++ lC +C + H+ XP_023525380.1 4 QCDVCNKDEALLFCTADDAALCSTCDHSVHH 34 7****99******************74 PP
2	zf-B_box	26.7	1.2e-08	56	87	4	35
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHk 35 + C+ ++e ++ lfC++++ lC+dC + +H+ XP_023525380.1 56 PLCDICQERRAFLFCQQDRAILCKDCDFPIHS 87 78***************************994 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MKIQCDVCNK DEALLFCTAD DAALCSTCDH SVHHANVLAS KHLRFPLLHP NNNNFPLCDI 60 CQERRAFLFC QQDRAILCKD CDFPIHSVNE LTQKHDRFLL TGVKLSCVSA GNVPSSSSMS 120 EKMANASSAP VSNSPSIAES STSNAQTVGA STDGCEAMNG VEYFIDAISG WHFDDFLDSS 180 STDAPPFGFF ELETSADSFS SEDWGIWSPE EEAAVPLFCS EIEMAERKKG RTLKEKTRGG 240 GGGGGGGGGG GDGGISVPEV DLRPRRFRSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	1e-48	DBB family protein