PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023525386.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 230aa MW: 26419 Da PI: 8.5187

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023525386.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	82	6.8e-26	20	72	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp LH+ Fv+ ve LGG + tPk+il++m+vkgL ++h+kSHLQ+YR+ XP_023525386.1 20 PRLRWTPALHRYFVQTVEVLGGRN-PTPKRILQMMGVKGLKISHIKSHLQMYRS 72 8*****************8876.9*************************7 PP
2	Myb_DNA-binding	43.7	6.1e-14	21	71	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+ ++ +v+ v+ lGg+ t+k+I ++mg kg+ ++ks++q+y+ XP_023525386.1 21 RLRWTPALHRYFVQTVEVLGGRnpTPKRILQMMGvKGLKISHIKSHLQMYR 71 89***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MKSCSSERIG VRQYNKSELP RLRWTPALHR YFVQTVEVLG GRNPTPKRIL QMMGVKGLKI 60 SHIKSHLQMY RSMKSEHGSS CEHVMMKQAM EQTRRRTLHS SDIKIFMSSV SSSSGILREE 120 EEFNRSNGKH DSSSNIEDRI ISQQDSDSSL ESRMSEEVEC IGGSMLEDQT CELSLSLKPT 180 HHSPITQQIL QRQLQLCPTI PHHQHPNTSP NFVRLNEFPH PHHINLDLTI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	2e-23	G2-like family protein