PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023525459.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 437aa MW: 49051.1 Da PI: 6.3754

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023525459.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.2	6.5e-53	21	148	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL+ kv + ++ i+evd++++ePw+Lp +k +e+ewyf+s rd+ky+tg r+nrat +gyWkatgkd+ev+s+ XP_023525459.1 21 LPPGFRFHPTDEELITFYLASKVFKGSFCG-VEIAEVDLNRCEPWELPDVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSA 114 79***********************777.45***********8888899**********************************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g+l g+kktLvfy+grap+gekt+Wvmheyrl XP_023525459.1 115 sNGSLLGMKKTLVFYRGRAPRGEKTKWVMHEYRL 148 78899*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MMAMEQILSE LNGEELNEQG LPPGFRFHPT DEELITFYLA SKVFKGSFCG VEIAEVDLNR 60 CEPWELPDVA KMGEREWYFY SLRDRKYPTG LRTNRATGAG YWKATGKDRE VYSASNGSLL 120 GMKKTLVFYR GRAPRGEKTK WVMHEYRLDG DFSYRHACKE EWVICRIFHK NGEKKNPMFP 180 CHAYLLESAA ALSSSTTSNS LPPLLETTPT TLIECQSQAA MQAFQNPFQI HQPPESDLKS 240 FVTSVVSQSN LLSSNEQPLQ QHHQQHKPPP PPPISINTIS IPSNNINPIA NANSNTYTPS 300 ASSSSSSSLL PSILFNSLLS HQDSTVLLKQ QQHQQQQCDV FKQFKAEASF TTHFEPAEAN 360 SDFMDMMKMQ PNPPSYHQHP LSFEMECSSP PAPAAEVSVH DISTSIAFTK AGYQTMLDPH 420 INIVHAHAHG ESWPLDA

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MMAMEQILSE LNGEELNEQG LPPGFRFHPT DEELITFYLA SKVFKGSFCG VEIAEVDLNR  60
CEPWELPDVA KMGEREWYFY SLRDRKYPTG LRTNRATGAG YWKATGKDRE VYSASNGSLL  120
GMKKTLVFYR GRAPRGEKTK WVMHEYRLDG DFSYRHACKE EWVICRIFHK NGEKKNPMFP  180
CHAYLLESAA ALSSSTTSNS LPPLLETTPT TLIECQSQAA MQAFQNPFQI HQPPESDLKS  240
FVTSVVSQSN LLSSNEQPLQ QHHQQHKPPP PPPISINTIS IPSNNINPIA NANSNTYTPS  300
ASSSSSSSLL PSILFNSLLS HQDSTVLLKQ QQHQQQQCDV FKQFKAEASF TTHFEPAEAN  360
SDFMDMMKMQ PNPPSYHQHP LSFEMECSSP PAPAAEVSVH DISTSIAFTK AGYQTMLDPH  420
INIVHAHAHG ESWPLDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76420.1	3e-96	NAC family protein