PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023525473.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 187aa    MW: 20761.1 Da    PI: 6.3574
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023525473.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.8e-183079255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  XP_023525473.1 30 LYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 79
                    69****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MSQTEEPPTQ SISPSSSSSK RVRDSSKHPL YRGVRMRAWG KWVSEIREPR KKSRIWLGTF  60
PTPEMAARAH DVAALSIKGN NSAILNFPEL AHSLPRPASF APRDIQAAAA KAAHMDPSQY  120
SASAANDDSD DLAEIIKLPN LGTNYDHSIG NNEFVLMDSS ESCWAYPPPW VRTMEDTAED  180
GNFLRDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.14e-61ERF family protein