PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023525488.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TCP

Protein Properties

Length: 194aa MW: 21707.5 Da PI: 7.9701

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023525488.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	101.2	1.9e-31	28	139	2	105
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...................ssssaseceaes 77 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk ++WLl++ak +i+el+ + + XP_023525488.1 28 FGGKDRHSKVYTIRGLRDRRIRLSISTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLpipsvslgldyqsmllphaQ----------- 111 689*************************************************************44444444433333333321........... PP TCP 78 ssssasnsssg.................kaaksaakskksqksaa 105 + + ++q++ + XP_023525488.1 112 --------TRPhrsefkigkeaedgvpaT---------DEQNELK 139 ........222222222222222222221.........2222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
MPASSSSSTV TPWLRLKDPR IVRVSRAFGG KDRHSKVYTI RGLRDRRIRL SISTAIQLYD 60 LQDRLGLNQP SKVVDWLLNA AKDEIDELPP LPIPSVSLGL DYQSMLLPHA QTRPHRSEFK 120 IGKEAEDGVP ATDEQNELKP NSNPSQASSF SMLLNTVGAI PFGYHHWEAS TPTPSNLPFF 180 TSQGEDLHNF ILNH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	4e-46	TCP family protein