PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023525507.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 236aa    MW: 25981.3 Da    PI: 7.6288
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023525507.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.95.6e-1179126454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE+ RRdr+N++f +L ++l +    + +K +Ka+iL  Av+ +++L
  XP_023525507.1  79 SKACREKLRRDRLNEKFLTLGSILEPG---RTPKTDKAAILVDAVRMVNQL 126
                     5678**********************9...8****************9999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MVSPENSNWL FDYGLIDDIP VSDANFPVTS SSFSWAVQPF DGTHDVGAEI DGSSADLDGR  60
LESGSKKRVR SDSCSGSSSK ACREKLRRDR LNEKFLTLGS ILEPGRTPKT DKAAILVDAV  120
RMVNQLRSEA QKLKESNSSL QDKIKELKAE KNELRDEKQR LKADKEKLEQ QVKSMHAHPA  180
GFLPPPIPTF AAQSQAPGGN KLVPFIGYHP SVAMWQFMPP AAVDTSQDHV LRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.17e-98bHLH family protein