PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023525528.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 192aa    MW: 21018.1 Da    PI: 7.3606
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023525528.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.25.5e-201666256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr ++ +gr++AeIrdp++   ++r++lg+f taeeAa+a++aa+++++g+
  XP_023525528.1 16 RYRGVRKRP-WGRYAAEIRDPRK---KTRVWLGTFNTAEEAARAYDAAAREFRGA 66
                    59*******.**********843...6*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MAAGLRSTST AAVEIRYRGV RKRPWGRYAA EIRDPRKKTR VWLGTFNTAE EAARAYDAAA  60
REFRGANAKT NFPTPNEYLI DDNNNNKFRR SACSSPSESS TVDSSSAPSP TDASLTRFLD  120
GSHPPAISRP IFFFDAFAQA EKMSDFRRTV TVAVAGGSAS DSDSSSVVDF DDDSQKSRPF  180
DFDLNLPAVE VA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.11e-22ERF family protein